Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941985.1_cds_XP_016485635.1_76543
CDS Infomation

[gene=LOC107806035] [db_xref=GeneID:107806035] [protein=protease Do-like 9] [protein_id=XP_016485635.1] [location=join(20769..21330,21965..22164,22258..22438,25030..25221,26514..26749,27477..27578,27683..27733,27844..27948,28024..28122)] [gbkey=CDS]
Sequence

ATGGCAGGACGCAAACGAGGAAGAAAGCCCAAATCAGATCCCCTTTCACCAGCAGCAGAC
ATCCCAACATCAACTTCACCCCACATTGACGACGACGTCGTTTTCTCCGTCAGCAACGTT
GAGCTCATCGACCCACCTCCTTCCACTTCCCGTCCCCGCCGTGGTCGGCCCCGCAAAATC
CTTAAATTACCCGAAAACTCTAACCCTGAAAATGGAAAAACCCTAAAAAAAGCAACACCA
CGCGTGATTAATAAACCCAACGGGGTAGGGGTAGCCTCTCTTGAGGGTACTACTGTAAAT
AATGCGGATGTTGCTAGGGTGGTGCCGGCAATGGATGCTGTAGTGAAGGTGTTTTGCGTT
CACACAGAACCGAATTATTCACTACCGTGGCAGCGGAAGCGACAATACAGTTCGAGCAGT
AGTGGATTTGTTATCAAAGGAAGAAGGGTTCTGACAAATGCACACTCTGTGGAGCATTAC
ACCCAGGTTAAGTTGAAGAAGAGAGGGTCCGATACCAAGTATGTTGCCACTGTGCTCGCT
ATTGGAACTGAATGTGATATTGCTTTGCTTACCGTGGATGATGATGAGTTCTGGGAGGGA
GTCTCAGCTGTAGAATTTGGGGATTTGCCAGCACTTCAAGATGCTGTGACAGTAGTAGGT
TATCCAATTGGGGGTGACACAATCTCCGTGACCAGTGGTGTTGTTTCACGCATAGAGATA
TTATCTTATGTTCATGGGTCTACTGAACTTTTGGGCCTCCAGATTGATGCAGCTATAAAT
TCTGGAAATTCTGGTGGGCCTGCTTTTAATGATAAAGGAAATTGTGTAGGTATCGCATTT
CAGTCTCTTAAACATGAAGATGTGGAGAACATTGGTTATGTCATCCCAACACCTGTAATC
ATGCACTTCATTCAAGACTATGAGAAGAATGGAGCATATACCGGGTTTCCTATTCTGGGG
ATTGAGTGGCAGAAGATGGAAAATCCAGATCTTCGGTTATCCATGGGAATGAAACCTGAC
CAGAAAGGTGTCCGTATTAGAAGAATTGACCCTACTGCACCAGAGTCTATGTTGTTGATG
CCATCCGATGTACTCCTAAGCTTTGACGGGGTTGACATTGCCAATGATGGAACAGTTCCA
TTTCGGCATGGAGAGCGTATAGGTTTTAGTTATCTTGTATCCCAAAAATATTCCGGCGAC
AGTGCTGCAGTTAAAGTTCTTCGTCGTAATTCTGAGATATTGAATTTCAAGATCAAACTT
GCAACTCAGATGAGGCTTGTTCCAGCTCACAACAAGGGGAGACCTCCATCGTATTATATT
ATAGCTGGATTTGTTTTTACCACTGTATCTGTTCCATATCTTCATTCCGAGTATGGAAAG
GATTACGAGTATGAAGCTCCTGTAAAGCTGTTGGACAAACTCTTGCATGAATTTCGACAA
TCACCCGACGAACAGATTGTTGTGGTTTCTCAGGTGCTTGTTGCTGACATTAACATCGGA
TATGAGGAAATAGTTAACACTCAGGTTCTTGCTTTTAACAGTAAGCCTGTGAAAAATTTG
AAGAGCTTGGCAAGAATGGTAGAGAACTGCAATGATGAGTTTTTAAAGTTGGATTTGGAG
TATCAGCAGGTGGTAGTCCTTCAGACAGAGACAGCAAAATCTGCTACATCAGACATCCTT
ACTACACATTGTATTCCTTCTGCCATGTCCGAGGATCTCAGGATGTAA

Peptide Sequence

PEP ID

XP_016485635.1
PEP Infomation

PREDICTED: protease Do-like 9 [Nicotiana tabacum]
Sequence

MAGRKRGRKPKSDPLSPAADIPTSTSPHIDDDVVFSVSNVELIDPPPSTSRPRRGRPRKI
LKLPENSNPENGKTLKKATPRVINKPNGVGVASLEGTTVNNADVARVVPAMDAVVKVFCV
HTEPNYSLPWQRKRQYSSSSSGFVIKGRRVLTNAHSVEHYTQVKLKKRGSDTKYVATVLA
IGTECDIALLTVDDDEFWEGVSAVEFGDLPALQDAVTVVGYPIGGDTISVTSGVVSRIEI
LSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVI
MHFIQDYEKNGAYTGFPILGIEWQKMENPDLRLSMGMKPDQKGVRIRRIDPTAPESMLLM
PSDVLLSFDGVDIANDGTVPFRHGERIGFSYLVSQKYSGDSAAVKVLRRNSEILNFKIKL
ATQMRLVPAHNKGRPPSYYIIAGFVFTTVSVPYLHSEYGKDYEYEAPVKLLDKLLHEFRQ
SPDEQIVVVSQVLVADINIGYEEIVNTQVLAFNSKPVKNLKSLARMVENCNDEFLKLDLE
YQQVVVLQTETAKSATSDILTTHCIPSAMSEDLRM

Transcript Sequence

Gene sequence data has not been registered.